Please use this identifier to cite or link to this item: http://sgc.anlis.gob.ar/handle/123456789/2433
Title: Future-proofing and maximizing the utility of metadata: The PHA4GE SARS-CoV-2 contextual data specification package
Authors: Griffiths, Emma J 
Timme, Ruth E 
Mendes, Catarina Inês 
Page, Andrew J 
Alikhan, Nabil-Fareed 
Fornika, Dan 
Maguire, Finlay 
Campos, Josefina 
Park, Daniel 
Olawoye, Idowu B 
Oluniyi, Paul E 
Anderson, Dominique 
Christoffels, Alan 
da Silva, Anders Gonçalves 
Cameron, Rhiannon 
Dooley, Damion 
Katz, Lee S 
Black, Allison 
Karsch-Mizrachi, Ilene 
Barrett, Tanya 
Johnston, Anjanette 
Connor, Thomas R 
Nicholls, Samuel M 
Witney, Adam A 
Tyson, Gregory H 
Tausch, Simon H 
Raphenya, Amogelang R 
Alcock, Brian 
Aanensen, David M 
Hodcroft, Emma 
Hsiao, William W L 
Vasconcelos, Ana Tereza R 
MacCannell, Duncan R 
Keywords: COVID-19;Biologia Computacional;Metadados;Genómica
Issue Date: 2022
Journal: GigaScience 
Abstract: 
The Public Health Alliance for Genomic Epidemiology (PHA4GE) (https://pha4ge.org) is a global coalition that is actively working to establish consensus standards, document and share best practices, improve the availability of critical bioinformatics tools and resources, and advocate for greater openness, interoperability, accessibility, and reproducibility in public health microbial bioinformatics. In the face of the current pandemic, PHA4GE has identified a need for a fit-for-purpose, open-source SARS-CoV-2 contextual data standard.
Description: 
Fil: Griffiths, Emma J. Faculty of Health Sciences, Simon Fraser University; Canada

Fil: Timme, Ruth E. Center for Food Safety and Applied Nutrition, U.S. Food and Drug Administration, College Park; USA

Fil: Mendes, Catarina Inês. Instituto de Microbiologia, Instituto de Medicina Molecular, Faculdade de Medicina, Universidade de Lisboa; Portugal

Fil: Page, Andrew J. Microbes in the Food Chain, Quadram Institute Bioscience, Norwich; United Kingdom

Fil: Alikhan, Nabil-Fareed. Microbes in the Food Chain, Quadram Institute Bioscience, Norwich United Kingdom

Fil: Fornika, Dan. BC Centre for Disease Control Public Health Laboratory, Vancouver; Canada

Fil: Campos, Josefina. ANLIS Dr.C.G.Malbrán. Instituto Nacional de Enfermedades Infecciosas; Argentina

Fil: Park, Daniel. Infectious Disease and Microbiome Program, The Broad Institute of MIT and Harvard, Cambridge; USA

Fil: Olawoye, Idowu B. African Center of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede; Nigeria

Fil: Oluniyi, Paul E. Department of Biological Sciences, College of Natural Sciences, Redeemer's University, Ede; Nigeria

Fil: Anderson, Dominique. South African Medical Research Council Bioinformatics Unit, South African National Bioinformatics Institute, University of the Western Cape; South Africa

Fil: Christoffels, Alan. South African Medical Research Council Bioinformatics Unit, South African National Bioinformatics Institute, University of the Western Cape ;South Africa

Fil: Gonçalves da Silva, Anders. Microbiological Diagnostic Unit Public Health Laboratory, The Peter Doherty Institute for Infection and Immunity, The University of Melbourne, Melbourne; Australia

Fil: Cameron, Rhiannon. Faculty of Health Sciences, Simon Fraser University; Canada

Fil: Dooley, Damion. Faculty of Health Sciences, Simon Fraser University; Canada

Fil: Katz, Lee S. Center for Food Safety, University of Georgia, Atlanta; USA

Fil: Black, Allison. Department of Epidemiology, University of Washington; USA

Fil: Karsch-Mizrachi, Ilene. National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda; USA

Fil: Barrett, Tanya. National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda; USA

Fil: Johnston, Anjanette. National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda; USA

Fil: Connor, Thomas R. Organisms and Environment Division, School of Biosciences, Cardiff University; United Kingdom

Fil: Nicholls, Samuel M. University of Birmingham; United Kingdom

Fil: Witney, Adam A. Institute for Infection and Immunity, St George's, University of London; United Kingdom

Fil: Tyson, Gregory H. Center for Veterinary Medicine, U.S. Food and Drug Administration; USA

Fil: Tausch, Simon H. Department of Biological Safety, German Federal Institute for Risk Assessment; Germany

Fil: Raphenya, Amogelang R. Department of Biochemistry and Biomedical Sciences and the Michael G. DeGroote Institute for Infectious Disease Research, McMaster University; Canada

Fil: Alcock, Brian. Department of Biochemistry and Biomedical Sciences and the Michael G. DeGroote Institute for Infectious Disease Research, McMaster University; Canada

Fil: Aanensen, David M. Centre for Genomic Pathogen Surveillance, Wellcome Genome Campus; United Kingdom

Fil: Hodcroft, Emma. Biozentrum, University of Basel; Switzerland

Fil: Hsiao, William W L. Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver; Canada

Fil: Vasconcelos, Ana Tereza R. Bioinformatics Laboratory National Laboratory of Scientific Computation LNCC/MCTI; Brazil

Fil: MacCannell, Duncan R. Office of Advanced Molecular Detection, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention; USA
URI: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8847733/
http://sgc.anlis.gob.ar/handle/123456789/2433
DOI: 10.1093/gigascience/giac003
Appears in Collections:Publicaciones INEI

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